Haplogroup O-M95

In genetics, Haplogroup O-M95 is a human Y-chromosome DNA haplogroup. Haplogroup O-M95 is a descendant branch of Haplogroup O-P31.

Distribution

Haplogroup O-M95 is distributed widely in Asia, from southern India to the Altai Mountains and Central Asia in the west, and from Indonesia to northern China and Japan in the east. It is found only at marginally low frequencies of approximately 1% at the periphery of its distribution in southern India, Central Asia, northern China, and Japan, but many populations within the vast intervening territory in South Asia, Southeast Asia, and southern China display a greatly elevated frequency of Haplogroup O-M95 Y-chromosomes. Patrilines within Haplogroup O-M95 predominate among the Austroasiatic-speaking populations of South and Southeast Asia, such as the Khmer of Cambodia and the Khasi of Meghalaya in northeastern India. Some researchers have reported that slightly over half of all men in a composite sample of Austroasiatic speakers belonged to Haplogroup O-M95. Haplogroup O-M122, which attains its peak frequency among the Sino-Tibetan and Hmong–Mien peoples of China and Southeast Asia, and Haplogroup O-M119, which predominates among Taiwanese aborigines and many populations of the Philippines, also generally occur among speakers of Austroasiatic languages in South China and the Indochinese Peninsula, but usually at much lower frequencies than Haplogroup O-M95. The hypothesis that Haplogroup O-M95 was the major Y-chromosome haplogroup of the proto-Austroasiatic population is strengthened by the fact that Haplogroup O-M95 is the only haplogroup found among many Austroasiatic-speaking tribes, such as the Mlabri people of Thailand, Mang people of southern China and northern Vietnam, Juang of mainland India, and the Nicobarese and Shompen of the Nicobar Islands ( and ).

Haplogroup O-M95 also has been observed with high frequency in samples of Tai–Kadai-speaking peoples of Thailand and neighboring areas, which may reflect assimilation of the older Austroasiatic Mon–Khmer populations that have left ample evidence of their presence in the region prior to the immigration of Tai–Kadai speakers.

Outside of the region in which Austroasiatic languages are currently spoken or have a historically attested presence, Haplogroup O-M95 reaches its highest frequencies among the populations of the islands of Sumatra, Java, Bali, and Borneo in western and central Indonesia . Haplogroup O-M95 has been found to be by far the most common Y-chromosome haplogroup among the Balinese, occurring in approximately 58.6% (323/551) of a sample of Balinese men; Haplogroup O-M119 and Haplogroup O-M122, which are typical of Austronesian peoples outside of Malaysia and Indonesia, were observed in only 18.1% (100/551) and 6.9% (38/551) of Balinese men . Haplogroup O-M95 has also been found to be the most frequently occurring haplogroup among Malay men in Singapore . The reason for its substantial presence in these populations, all of which are Austronesian-speaking, is yet to be elucidated.

Subclade distribution

  • O-PK4 This lineage has been relocated upstream of M95 following a paper published on the subject in 2011. Found in three samples of Han Chinese: 3/65 = 4.6% South China, 1/129 = 0.8% North China, 1/167 = 0.6% East China.
    • O-M95 This lineage is considered typical of Austroasiatic peoples, Tai peoples, Malays, Indonesians, Japanese and Malagasy, with a moderate distribution throughout South Asia, Southeast Asia, East Asia, Central Asia, and Han Chinese.
      • O-M88 This lineage is frequently found among Hani, She people, Vietnamese with a moderate distribution among Tai peoples, Cambodians, Qiang, Hlai, Miao, Yao, Taiwanese aborigines, populations of Borneo , Han Chinese of Sichuan, Guangxi, and Guangdong, and Pashtuns
      • O-M297 More research is needed on this lineage. It is claimed to be downstream from M95 and parallel to M88.

Phylogenetics

Phylogenetic history

Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome Phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.

YCC 2002/2008 (Shorthand)

(α)

(β)

(γ)

(δ)

(ε)

(ζ)

(η)

YCC 2002 (Longhand)

YCC 2005 (Longhand)

YCC 2008 (Longhand)

YCC 2010r (Longhand)

ISOGG 2006

ISOGG 2007

ISOGG 2008

ISOGG 2009

ISOGG 2010

ISOGG 2011

ISOGG 2012

O-M175

26

VII

1U

28

Eu16

H9

I

O*

O

O

O

O

O

O

O

O

O

O

O-M119

26

VII

1U

32

Eu16

H9

H

O1*

O1a

O1a

O1a

O1a

O1a

O1a

O1a

O1a

O1a

O1a

O-M101

26

VII

1U

32

Eu16

H9

H

O1a

O1a1

O1a1a

O1a1a

O1a1

O1a1

O1a1a

O1a1a

O1a1a

O1a1a

O1a1a

O-M50

26

VII

1U

32

Eu16

H10

H

O1b

O1a2

O1a2

O1a2

O1a2

O1a2

O1a2

O1a2

O1a2

O1a2

O1a2

O-P31

26

VII

1U

33

Eu16

H5

I

O2*

O2

O2

O2

O2

O2

O2

O2

O2

O2

O2

O-M95

26

VII

1U

34

Eu16

H11

G

O2a*

O2a

O2a

O2a

O2a

O2a

O2a

O2a

O2a

O2a1

O2a1

O-M88

26

VII

1U

34

Eu16

H12

G

O2a1

O2a1

O2a1

O2a1

O2a1

O2a1

O2a1

O2a1

O2a1

O2a1a

O2a1a

O-SRY465

20

VII

1U

35

Eu16

H5

I

O2b*

O2b

O2b

O2b

O2b

O2b

O2b

O2b

O2b

O2b

O2b

O-47z

5

VII

1U

26

Eu16

H5

I

O2b1

O2b1a

O2b1

O2b1

O2b1a

O2b1a

O2b1

O2b1

O2b1

O2b1

O2b1

O-M122

26

VII

1U

29

Eu16

H6

L

O3*

O3

O3

O3

O3

O3

O3

O3

O3

O3

O3

O-M121

26

VII

1U

29

Eu16

H6

L

O3a

O3a

O3a1

O3a1

O3a1

O3a1

O3a1

O3a1

O3a1

O3a1a

O3a1a

O-M164

26

VII

1U

29

Eu16

H6

L

O3b

O3b

O3a2

O3a2

O3a2

O3a2

O3a2

O3a2

O3a2

O3a1b

O3a1b

O-M159

13

VII

1U

31

Eu16

H6

L

O3c

O3c

O3a3a

O3a3a

O3a3

O3a3

O3a3a

O3a3a

O3a3a

O3a3a

O3a3a

O-M7

26

VII

1U

29

Eu16

H7

L

O3d*

O3c

O3a3b

O3a3b

O3a4

O3a4

O3a3b

O3a3b

O3a3b

O3a2b

O3a2b

O-M113

26

VII

1U

29

Eu16

H7

L

O3d1

O3c1

O3a3b1

O3a3b1

-

O3a4a

O3a3b1

O3a3b1

O3a3b1

O3a2b1

O3a2b1

O-M134

26

VII

1U

30

Eu16

H8

L

O3e*

O3d

O3a3c

O3a3c

O3a5

O3a5

O3a3c

O3a3c

O3a3c

O3a2c1

O3a2c1

O-M117

26

VII

1U

30

Eu16

H8

L

O3e1*

O3d1

O3a3c1

O3a3c1

O3a5a

O3a5a

O3a3c1

O3a3c1

O3a3c1

O3a2c1a

O3a2c1a

O-M162

26

VII

1U

30

Eu16

H8

L

O3e1a

O3d1a

O3a3c1a

O3a3c1a

O3a5a1

O3a5a1

O3a3c1a

O3a3c1a

O3a3c1a

O3a2c1a1

O3a2c1a1

Research publications

The following research teams per their publications were represented in the creation of the YCC Tree.

Phylogenetic trees

This phylogenetic tree of haplogroup O subclades is based on the YCC 2008 tree and subsequent published research.

  • O-M95 (M95)
    • O-M88 (M88, M111)

Table of frequencies of O-M95(xM88/M111)

Population

Frequency

Count

Source

SNPs

Nicobarese

1.00

11

M95(xM88)

Juang

0.980

49

M95(xM88)

Lamet

0.857

35

M95(xM88)

Korku

0.814

59

M95(xM88)

Inh

0.794

34

M95(xM88)

Katu

0.689

45

M95(xM88)

Mal

0.660

50

M95(xM88)

Ho

0.658

79

M95(xM88)

Bo

0.643

28

M95(xM88)

Talieng

0.629

35

M95(xM88)

Brau

0.625

32

M95(xM88)

Khmu

0.608

51

M95(xM88)

Oy

0.600

50

M95(xM88)

Korwa

0.595

42

M95(xM88)

Li (Hlai)

0.588

34

M95(xM88)

Balinese

0.573

641

M95(xM111)

Alak

0.567

30

M95(xM88)

Suy

0.564

39

M95(xM88)

Bit

0.536

28

M95(xM88)

Aheu

0.526

38

M95(xM88)

Bugan

0.500

32

M95(xM88)

Java (mostly sampled in Dieng)

0.492

61

M95(xM111)

Ngeq

0.486

35

M95(xM88)

Jeh

0.469

32

M95(xM88)

Santhal

0.468

109

M95(xM88)

Munda

0.453

53

M95(xM88)

Laven

0.420

50

M95(xM88)

So

0.420

50

M95(xM88)

Muong

0.417

12

M95(xM88)

Khasi

0.413

92

M95(xM88)

Kharia

0.389

36

M95(xM88)

Buyi

0.371

35

M95(xM88)

Lao (Luang Prabang, Laos)

0.360

25

M95(xM88)

Kinh

0.333

15

M95(xM88)

Oraon

0.319

91

M95(xM88)

Banjarmasin, Indonesia

0.318

22

M95(xM88)

Malaysia

0.313

32

M95(xM111)

Mountain Kimmun

0.313

32

M95(xM88)

Blang

0.308

52

M95(xM88)

Miao (Yunnan)

0.306

49

M95(xM88)

Cham (Binh Thuan, Vietnam)

0.305

59

M95(xM88)

Lowland Kimmun

0.244

41

M95(xM88)

Zhuang

0.235

166

M95(xM111)

Palyu

0.233

30

M95(xM88)

Kota Kinabalu, Malaysia

0.215

65

M95(xM88)

Northern Mien

0.212

33

M95(xM88)

Flower-head Mien

0.211

19

M95(xM88)

Borneo (Indonesia)

0.209

86

M95(xM111)

Southern Mien

0.194

31

M95(xM88)

Garo

0.182

33

M95(xM88)

Blue Kimmun

0.179

28

M95(xM88)

Thai (Northern Thailand)

0.176

17

M95(xM88)

Xinhmul

0.172

29

M95(xM88)

Malagasy

0.171

35

M95(xM88)

Miao (Guizhou)

0.163

49

M95(xM88)

Lowland Yao

0.161

31

M95(xM88)

Batak Toba (Sumatra)

0.158

38

M95(xM111)

Daur

0.154

39

M95(xM88)

Western Mien

0.149

47

M95(xM88)

Mandar (Sulawesi)

0.130

54

M95(xM111)

Pahng

0.129

31

M95(xM88)

Kinh (Hanoi, Vietnam)

0.118

76

M95(xM88)

Kataang

0.108

37

M95(xM88)

Han (South China)

0.092

65

PK4(xM88)

Qiang

0.091

33

M95(xM88)

Top Board Mien

0.091

11

M95(xM88)

Thin Board Mien

0.091

11

M95(xM88)

Miao (Hunan)

0.090

100

M95(xM88)

She

0.088

34

M95(xM88)

Native Mien

0.073

41

M95(xM88)

Vietnamese

0.071

70

M95(xM111)

Han Chinese (China)

0.061

165

M95(xM111)

Hmong Daw (Laos)

0.059

51

M95(xM88)

Hani

0.059

34

M95(xM88)

Yao (Liannan, Guangdong)

0.057

35

M95(xM88)

Bunu

0.056

36

M95(xM88)

Kapingamarangi

0.048

21

M95(xM88)

Flores

0.046

394

M95(xM111)

Japanese

0.043

47

M95(xM88)

Western Samoa

0.040

25

M95(xM88)

Ewenki (China)

0.038

26

M95(xM88)

Northern She (Zhejiang)

0.036

56

M95(xM88)

Miao (China)

0.034

58

M95(xM111)

Han (Lanzhou, Gansu)

0.033

30

M95(xM88)

Han (Yili, Xinjiang)

0.031

32

M95(x88)

Han (North China)

0.031

129

PK4(xM88)

Han (Chengdu, Sichuan)

0.029

34

M95(xM88)

Han (East China)

0.024

167

PK4(xM88)

Japanese

0.024

210

M95(xM111)

Philippines

0.021

48

M95(xM111)

Yao (China)

0.017

60

M95(xM111)

Sumba

0.003

350

M95(xM111)

Table of frequencies of O-M88/M111

Population

Frequency

Count

Source

SNPs

Xinhmul

0.690

29

M88

Hani

0.441

34

M88

She

0.353

51

M111

Suy

0.308

39

M88

Kinh (Hanoi, Vietnam)

0.303

76

M88

Lowland Yao

0.290

31

M88

Kataang

0.270

37

M88

Zaomin

0.216

37

M88

Vietnamese

0.200

70

M111

Buyi

0.171

35

M88

Lao (Luang Prabang, Laos)

0.120

25

M88

Han (Chengdu, Sichuan)

0.118

34

M88

Cham (Binh Thuan, Vietnam)

0.085

59

M88

Zhuang

0.072

166

M111

Miao (China)

0.069

58

M111

Thai (Northern Thailand)

0.059

17

M88

Han (China)

0.055

165

M111

Taiwanese aborigines

0.051

39

M88

Banjarmasin, Indonesia

0.045

22

M88

Pathans (Dir, Pakistan)

0.042

96

M88, M111

Malaysia

0.031

32

M111

Kota Kinabalu, Malaysia

0.031

65

M88

Qiang

0.030

33

M88

Li (Hlai)

0.029

34

M88

Yao (Liannan, Guangdong)

0.029

35

M88

Philippines

0.021

48

M111

Taiwanese aborigines

0.021

48

M111

Yao (China)

0.017

60

M111

See also

Genetics

Y-DNA O subclades

Y-DNA backbone tree

Footnotes

Works cited

Books

Conference Posters

Journals

Further reading